In a memo seen by Reuters, Trump's acting deputy attorney general, Emil Bove, told Justice Department staff that state and local authorities must co-operate with the immigration crackdown and federal prosecutors "shall investigate incidents involving any such misconduct for potential prosecution."
The Justice Department could also challenge laws that complicate the effort, Bove wrote.
The policy was issued as the new Republican administration prepared to step up policing of illegal immigration in cities with significant migrant populations, setting up potential confrontations with officials in cities such as New York and Chicago that limit co-operation with such efforts.
The new memo underscored how Trump's Justice Department may try to back his immigration agenda by expanding threats of criminal charges beyond immigrants or those who employ them to city and state officials. It is the latest in a series of executive actions Trump has taken to curb illegal immigration, his top priority.
The Trump administration plans to send 1500 troops to help secure the US-Mexico border. (EPA PHOTO)
During Trump's first 2017-2021 term in office, many Democratic officials refused to co-operate with his enforcement efforts, and some vowed to defy him again.
But resistance in the party is not monolithic this time. In the US House of Representatives on Wednesday 46 Democrats - one-fifth of their number - joined 217 Republicans to pass legislation that would require immigrants who are in the country illegally to be held for deportation if they are accused of theft.
The bill has already passed the Senate with Democratic support and now heads to Trump's desk to be signed into law.
"The American people want us to do something about the border and I think we'd be hard-pressed to not say that we have to deport criminals," Representative Tom Suozzi, a moderate Democrat who voted for the bill, told Reuters.
Trump has issued a broad ban on asylum and taken steps to restrict citizenship for children born on American soil. A US official said on Wednesday the military would dispatch 1500 additional active-duty troops to the Mexico-US border on Trump's orders.
The administration has rescinded guidance from his Democratic predecessor Joe Biden that had limited immigration arrests near schools, churches and other sensitive places. Trump has also expanded immigration officers' power to deport migrants who cannot prove they have been in the US for longer than two years.
His move to expand fast-track deportations faced a legal challenge on Wednesday, with immigration advocacy group Make the Road New York filing a lawsuit arguing the policy known as expedited removal violated the constitutional right to due process, immigration law and administrative law.
US civil rights groups meanwhile warned that an executive order signed by Trump on Monday - setting a 60-day window for officials to identify countries whose vetting and screening processes are "so deficient as to warrant a partial or full suspension on the admission of nationals from those countries" - laid the groundwork for reinstatement of a ban on travelers from predominantly Muslim or Arab countries.
State and local officials who resist or obstruct immigration enforcement could be charged under federal laws against defrauding the US or harbouring immigrants who are in the US unlawfully, according to the Justice Department memo.
Prosecutors who opt not to file criminal charges will need to explain their reasoning to superiors, the memo said.